NANOLC-EDGE.JPG - 794,551BYTES

What's new

New! 2024/04/01
New Comers to the lab have appeared. Karin Arima, Akane Omori, Ema Okumura, Akane Takeshita, Fumika Mori, Rieko Yamaguchi, Risa Chisaka, and Naujoks Lukas became our new lab members!

New! 2023/03/28-31
At 144th Annual Meeting of the Pharmaceutical Society of Japan (Yokohama), Tatsuya Sagawa (B4), Hiroto Kakiuchi (B4), Saki Toi (B4) and Yuna Hiranuma (B4) had oral presentation.

New! 2024/03/25
Kazuya Morikawa (M2), Takumi Kudou (M2), Kauzunori Machida (M2), Yuto Tanihuchi (M2), and Yutaro Asano (B4) have graduated from the lab. We hope they can start wonderful new life in their each way!!

New! 2024/02/10-12
At Academic Change A Protein Lifetime, 1st Area Meeting, Ubiquitin Research Group, Professor Ishihama had an oral presentation, Assistant Professors Kanao and Ogata had oral and poster presentations, and Shogo Furuya (iD1), Kaho Takamuro (B5), and Tatsuya Sagawa (B4) had poster presentations. Tatsuya Sagawa received the Best Poster Award. Congratulations!

New! 2024/01/30
At the 7th Kyoto Biological Mass Analysis Research Meeting International Symposium, 521st Living Space Symposium, Kazuya Morikawa (M2), Asato Maeda (M2), Takumi Kudou (M2), Kauzunori Machida (M2), Yuto Tanihuchi (M2), and Yutaro Asano (B4) had poster presentations.

2023/12/20
At Support for Pioneering Research Initiated by the Next Generation (SPRING) program (Osaka Metropolitan University), Eisuke Kanao had an invited presentation.

2023/12/12
At HUPO World Congress 2023 Busan (Korea), Jherico Geronca (M2) had a poster presentation. Jherico Geronca won the "HUPO 2023 Travel Award by JPrOS (HUPO Presentation Award)." Congratulation!

2023/12/06-12/08
At the 46th Annual Meeting of the Molecular Biology Society of Japan, Assistant Professor Ogata and Kaho Takamuro (B5) had a poster presentation.

2023/11/30-12/01
At the 43rd Symposium on Capillary Electrophoresis (SCE2023), Assistant Professor Kanao had invited presentations, and Assistant Professor Ogata and Takumi Kudo (M2) had an oral presentation. Takumi Kudo won the "Best Presentation Award." Congratulation!

2023/11/04
At the 9th Kyoto Symposium on the Future of Pharmacy, Professor Ishihama had an invited presentation.

2023/10/31-11/2
At the 95th Annual Meeting of the Japanese Biochemical Society, Professor Ishihama had an invited presentation, and Takumi Kudo (M2) had a poster presentation.

2023/10/26-10/28
At the 34th The Society for Chromatographic Sciences, Assistant Professor Ogata had an oral presentation, Koshin Akamatsu (M1) had a poster and oral presentation, and Shunsuke Tanaka (iD1) had a poster presentation.

2023/10/07
At 3rd International BMS Symposium 2023 in Kyoto, Assistant Professor Ogata and Assistant Professor Kanao had invited presentation, and Jherico Geronca (M2), Junqi Liang (M2) and Koshin Akamatsu (M1) had poster presentation. Jherico Geronca won "Symposium Award (Best Poster Presentation)." Congratulation!

2023/09/17-21
At HUPO World Congress 2023 Busan (Korea), Professor Ishihama had invited presentation and Jherico Geronca (M2) had poster presentation. Jherico Geronca became "Early Career Researcher Poster Competition First Place Winner (Graduate-level)." Congratulation!

2023/09/13
At 72nd Annual Meeting of the Japan Society for Analytical Chemistry (Kumamoto), Assistant Professor Kanao had invited presentation.

2023/09/08
At International Symposium for the 80th Anniversary of the Tohoku Branch of the Chemical Society of Japan (Sendai), Professor Ishihama had ivited presentation.

2023/08/31-09/01/
At PPF2023 (Kyoto), Assistant Professor Ogata, Takumi Kudo (M2), Kazunori Machida (M2) and Yuto Taniguchi (M2) had oral presentation. Assistant Professor Ogata and Takumi Kudo won "Incentive Award." Congratulation!

2023/08/20-22
At the AOMSC-KSMS 2023 (Korea), Professor Ishihama had invited presentation, Assistant Professor Ogata, Assistant Professor Kanao and Ayana Tomioka (D2) had oral presentation, and Assistant Professor Ogata had poster presentation.

2023/08/08
At Bunseki Hicho, vol. 17 (Osaka), Assistant Professor Kanao had invited presentation.

2023/07/28-29
At BMAS2023 (Hokkaido), Assistant Professor Ogata and Kazuya Morikawa (M2) had oral presentation, and Asato Maeda (M2) had poster presentation. Assistant Professor Ogata won "Hoshino Best Presentation Award." Congraturations!

2023/07/25-26
At The Annual Japanese Proteomics Society in 2023 (Nigata), Associate Professor Sugiyama had invited presentation, and Assistant Professor Ogata, Assistant Professor Kanao, Hiroshi Nishida (PhD), Ayana Tomioka (D2), Kazunori Machida (M2), Yuto Taniguchi (M2), Jherico Geronca (M2), Toshiki Hanada (B6) and Junqi Liang (M1) had oral and poster presentation.

2023/06/29
At 30th Chromatography Symposium (Gifu), Assistant Professor Kanao had oral and poster presentation.

2023/06/24
At The 70th Anniversary Ceremony of The Japan Society for Analytical Chemistry, The Kinki Branch (Osaka), Toshiki Hanada (B6) had poster presentation.

2023/06/19
At HPLC 2023 (51st International Symposium on High Performance Liquid Phase Separations and Related Techniques; Duesseldorf, Germany), Professor Ishihama had invited presentation and Assistant Professor Kanao had poster presentation.

2023/06/06-07
At ASMS2023 (Houston), Assistant Professor Ogata, Ayana Tomioka (D2) and Asato Maeda (M2) had poster presentation.

2023/05/30
At 2nd Joint Conference on Environmental Chemicals (Tokushima), Professor Ishihama had invited presentation.

2023/05/15-17
At 71th Annual Conference on Mass Spectrometry (Osaka), Professor Ishihama had invited presentation, Assistant Professor Kanao, Assistant Professor Ogata, Ayana Tomioka (D2) and Kazuya Morikawa (M2) had oral presentation, and Assistant Professor Kanao, Assistant Professor Ogata, Ayana Tomioka (D2), Kazuya Morikawa (M2), Yuka Muramatsu (M1) and Shogo Furuya (iD1) had poster presentation. Assistant Professor Kanao won "Best Presentation Award." Congraturations!

2023/05/09-10
At 11th AOHUPO and 7th AOAPO (Singapore), Professor Ishihama had invited presentation, and Associate Professor Sugiyama, Assistant Professor Kanao, Assistant Professor Ogata and Hiroshi Nishida (PD) had poster presentation.

2023/05/07
At YSF-AOHUPO (Singapore), Assistant Professor Ogata and Hiroshi Nishida (PD) had oral presentation.

2023/04/24
At 143th Annual Meeting of the Pharmaceutical Society of Japan (Hokkaido), Yuka Muramatsu (M1) and Shogo Furuya (iD1) won "Best Student Presentation Award." Congraturations!

2023/04/03
New Comers to the lab have appeared. Shunichi Ito, Hiroto kakiuchi, Saki Toi, Yuna Hiranuma and Tatsuya Sagawa became our new lab members!

2023/03/25-28
At 143th Annual Meeting of the Pharmaceutical Society of Japan (Hokkaido), Koshin Akamatsu (B4), Shunsuke Tanaka (B4), Yuka Muramatsu (B4) and Shogo Furuya (B4) had oral presentation.

2023/03/24
Hiroshi Nishida (D3), Takuya Hikita (M2), Yuka Li (M2), Yuta Watanabe (M2) and Takuru Yasui (B6) have graduated from the lab. We hope they can start wonderful new life in their each way!!

2023/03/19
Komori's (alumnus) paper on bioinertization of nanoLC/MS/MS systems for phosphoproteomics was published in Molecular & Cellular Proteomics. The paper is available from here.

2023/03/16
Assistant Professor Ogata had invited presentation at Meeting in Kitasato University (Kanagawa).

2023/03/04
At CCII/ CGM Joint Symposium -Genomics and Omics Study and Application to Human Biology- (Kyoto), Ayana Tomioka (D1) had invited presentation.

2023/03/02
At The 24th Chubu-area Colloquium of The Mass Spectrometry Society of Japan (Shidzuoka), Assistant Professor Ogata had invited presentation.

2023/03/02
At International Cancer Proteogenomics Symposium Tokyo 2023 (online), Professor Ishihama had invited presentation.

2023/01/30-31
At KBMSS (Kyoto), Ayana Nakai (D1), Takuya Hikita (M2), Yuka Li (M2), Yuta Watanabe (M2) had poster presentation.

2023/01/08
Our article on the investigation of mitochondrial translation by Koshi Imami (alumni) has been published in Journal of Biological Chemistry. The paper is available from here.

2023/01/05
New Comers to the lab have appeared. Gao Wen became our new lab members!

2022/12/23
Pei-Shan Wu has returned home safely. We wish him all the best.

2022/12/23
Assistant Professor Ogata's paper on Motif-targeted phosphoproteomics has been published in Cancers. The paper is available from here.

2022/12/13
In collaboration with Otsuka Lab (Graduate School of Engineering, Kyoto Univ.), Assistant Professor Kanao's paper about classification of EVs by lectin-immobilized sponge monoliths has been published in Analytical Chemistry (ACS). The paper is available from here.

2022/12/08
The paper in which Professor Ishihama and Assistant Professor Ogata are co-authors, has been published in Journal of proteome research. The paper is available from here.

2022/12/07-08
At HUPO 2022 (Cancun, Mexico), Assistant Professor Ogata, Hiroshi Nishida (D3) and Ayana Nakai (D1) had poster presentation. Hiroshi Nishida and Ayana Nakai won "AOHUPO Young Scientist Poster Award." Congraturations!

2022/11/30-12/02
At The 45th Anual Meeting of the Molecular Biology Society of Japan, Assistant Professor Ogata, Takuya Hikita(M2), Yuka Li(M2) and Kazuya Morikawa(M1) had poster presentation, Yuka Li(M2) and Kazuya Morikawa(M1) had science pitch, and Kazuya Morikawa(M1) had oral presentation.

2022/11/10-11
At The 95th Annual Meeting of the Japanese Biological Society, Professor Ishihama had invited presentation, Yuka Li(M2) had oral presentation, and Toshiki Hanada(B5) had poster presentation.

2022/11/03-04
At The 33th Society for Chromatographic Sciences, Assistant Professor Ogata and Takuru Yasui(B6) had oral presentation. Takuru Yasui(B6) won "The Best Presentation Award." Congraturations!

2022/10/07
At The 72th Meeting oh The Pharmaceutical Society of Japan in Kinki, Osaka, Yuta Watanabe(M2) had oral presentation.

2022/10/01
Liang Junqi passed entrance examination and became first grade student of master's course. Congratulations!

2022/09/24
At The 37th Fujita Conference, Kyoto, Professor Ishihama had invited presentation.

2022/09/22
Moritz Wiessmeier has returned home safely. We wish him all the best.

2022/09/14
At The Annual Meeting of the Japan Society for Analytical Chemistry in 2022, Okayama, Takuru Yasui(M2) had oral presentation.

2022/09/12
At the 19th Physical Pharmaceutical Forum for younger reseacher, online, Takuya Hikita(M2) had oral presentation.

2022/08/30
I-Ying Lin has returned home safely. We wish her all the best.

2022/08/10
At The Annual Japanese Proteomics Society in 2022, Kanagawa,Takuya Hikita(M2) and Ayana Nakai(D1) were selected for the Best Student Presentation Award. Congratulations!

2022/08/09-10
At The Annual Japanese Proteomics Society in 2022, Kanagawa, Professor Ishihama, Assistant Professor Kanao, Assistant Professor Ogata, Hiroshi Nishida(D3), Ayana Nakai(D1), Takuya Hikita(M2), Yuta Watanabe(M2), Takumi Kudo(M1) had poster presentation, and Assistant Professor Ogata, Hiroshi Nishida(M3), Ayana Nakai(D1), Takuya Hikita(M2), Takumi Kudo(M1) had oral presentation, and Associate Professor Sugiyama had Invited presentation.

2022/08/09
Darien Yeung has returned home safely. We wish him all the best.

2022/08/07
At The Pre-congress Webinar of The Annual Japanese Proteomics Society in 2022, Kanagawa, Professor Ishihama had invited presentation.

2022/08/04
At The 16th Summer Seminar for Young Reseachers in Kinki, Kyoto, Professor Ishihama had invited presentation.

2022/07/20
At The 8th Cancer Metabolism Meeting in Sado, Niigata, Professor Ishihama had invited presentation.

2022/07/13
At The 33rd Summer School for Young Chemists of the Section of Biofunctional Chemistry, Hyogo, Professor Ishihama had invited presentation.

2022/07/07
New Comers to the lab have appeared. I-Ying Lin became our new lab members!

2022/06/23
By the Mass Spectrometry Society of Japan, Assistant Professor Ogata and Harry (alumni)'s paper investigating the effect on CCS of phosphorylation on peptides was selected as 2022 Paper Award of the Mass Spectrometry Society of Japan. Congratulations! The paper is available from here.

2022/06/22-24
At the 70th Annual Conference on Mass Spectrometry, Japan, Assistant Professor Ogata had an oral presentation, Assistant Professor Kanao, Ayana Nakai (D1), Kazuya Morikawa (M1) and Asato Maeda (M1) had a poster presentation and Assistant Professor Kanao was selected for the Best Presentation Award. Congratulations!

2022/06/09-10
At the 29th Chromatography Symposium, Professor Ishihama had a pre-symposium event, Associate professor Sugiyama had a requested lecture, Assistant Professor Kanao and Ayana Nakai (D1) had an oral presentation, and Hiroshi Nishida (D3) had a poster presentation.

2022/06/10
New Comers to the lab have appeared. Darien Yeung became our new lab members!

2022/06/02
Our article on the investigation of a method for proteome-wide profiling of nascent polypeptide chains by affinity enrichment of puromycin- and stable isotope-labeled polypeptides by by Uchiyama (an alumnus) and Koshi Imami (alumni) has been published in iScience. The paper is available from here.

2022/05/06
New Comers to the lab have appeared. Moritz Wiessmeier became our new lab members!

2022/04/21
Asato Maeda, then B4 (now M1), was selected for the Best Student Presentation Award in the oral presentation at 142th Annual Meeting of the Pharmaceutical Society of Japan held online in March. Congratulations!

2022/04/01
New Comers to the lab have appeared. Koshin Akamatsu, Kaho Takamuro, Shunsuke Tanaka, Yuka Muramatsu, Shogo Furuya, and Yuto Taniguchi became our new lab members!

2022/03/31
Kana Nakata, Rentaro Yamashita and Tetsushi Kitsumoto have graduated from the lab. We hope they can start wonderful new life in their each way!!

2022/3/25-28
Assistant Professor Kanao, Asato Maeda (B4), Kazunori Machida (B4), Kazuya Norikawa (B4), Takumi Kudo (B4) and Toshiki Hanada (B4) had an oral presentation at 142th Annual Meeting of the Pharmaceutical Society of Japan (Online).

2022/3/23
Tomoya Niinae and Specific Assistant Professor Kosuke Ogata received their Ph.D Congratulations!

2022/3/16
Specific Assistant Professor Ogata had invited presentation at Meeting in Kitasato University(Online).

2022/1/14
Our article on the investigation of a motif-centric phosphoproteomics approach combined with multiplexed isobaric labeling by Ironman (an alumnus) and Specific Assistant Professor Kosuke Ogata has been published in Cell Report Methods. The paper is available from here.

2021/12/28
Our article on the investigation of a one-step method to isolate protein C-terminal peptides from V8 protease-digested proteins by metal oxide-based ligand-exchange chromatography, by Hiroshi Nishida(D2), has been published in Analytical Chemistry. The paper is available from here.

2021/12/16-21
At the 2021 International Chemical Congress of Pacific Basin Societies (Pacifichem 2021, online) Professer Ishihama had invited lecture and Assistant Professor Kanao had oral presentation.

2021/12/01-03
At the SCE2021, Professer Ishihama had Award-winning lecture of Shigeru Terada Award.

2021/12/01-03
At the 44th Anual Meeting of the Molecular Biology Society of Japan, Professer Ishihama and Specific Senior Lecturer Imami had oral presentation, Yuka Li(M1), Tomoya Niinae(D3) and Specific Assistant Professor Ogata had poster presentations.

2021/11/26
Assistant Professor Kanao had Award-winning lecture and Specific Assistant Professor Ogata had oral presentation at the 32th Society for Chromatographic Sciences.

2021/11/26
Assistant Professor Kanao won the Society for Chromatographic Sciences Encouragement Award. Congratulations!

2021/11/20
Specific Senior Lecturer Imami had invited presentation at the Biomedical Society for Stress Response, Japan.

2021/11/03
Specific Senior Lecturer Imami had oral presentation at the 94th Annual Meeting of the Japanese Biological Society.

2021/11/02
Our article on the investigation of a CoolTip protocol, a StageTip operated at 4 °C, by a specific assistant professor Kosuke Ogata, has been published in Molecular and Cellular Proteomics. The paper is available from here.

2021/10/29
Short communication for investigation of probes for enrichment of protein tyrosine phosphatases by Dr. Tsumagari (an alumnus) and Tomoya Niinae (D3) has been publised in Proteomics. The paper is available from here.

2021/10/17
Professor Ishihama had invited presentation at the Asian Conference on Analytical Sciences 2021 (ASIANALYSIS 2021).

2021/10/09
Professor Ishihama had invited presentation at the71th meeting of Pharmaceutical Society of Japan Kansai Branch

2021/10/01
New Comers to the lab have appeared. Liang Junqi and Jherico Geronca became our new lab members!

2021/09/24
Tsumagari-san (an alumnus) received his Ph.D Congratulations!

2021/09/23
Professor Ishihama had Award-winning lecture (Online) at the Japan Society for Analytical Chemistry.

2021/09/23
Professor Ishihama won the Japan Society for Analytical Chemistry Award. Congratulations!

2021/09/09
Professor Ishihama had online lecture at PhD course of TU Berlin.

2021/09/01-03
At BMAS2021, Assistant Professor Kanao, Specific Assistant Professor Ogata and Hiroshi Nishida (D2) had oral presentation, and Tomoya Niinae (D3) and Ayana Nakai (M2) had poster presentations.

2021/08/29-09/01
At PBA2021 31st International Symposium on Pharmaceutical and Biomedical Analysis, Professor Ishihama had keynote speech, Assistant Professor Kanao and Specific Assistant Professor Ogata had oral presentation, and Tomoya Niinae (D3), Hiroshi Nishida (D2) and Ayana Nakai (M2) had poster presentations.

2021/07/28
Terminomics protocol paper for Shedding proteome analysis by Dr. Tsumagari and Harry (alumni), has been publised in STAR Protocols. The paper is available from here.

2021/07/22
Specific Assistant Professor Ogata's paper about Tip-based TMT phosphoproteomics has been published in Journal of Proteome Research. The paper is available from here.

2021/07/19-21
Specific Senior Lecturer Imami, Specific Assistant Professor Ogata, Tomoya Niinae (D3) and Hiroshi Nishida (D2) had oral presentation at JPrOS 2021 (Online).

2021/07/17
Specific Senior Lecturer Imami had a requested lecture at the 6th Western Meeting of Japanese Society for Biomedical Mass Spectrometry.

2021/07/15
The paper in collaboration with Takeuchi Lab (Graduate School of Medicine, Kyoto University), in which Specific Assistant Professor Ogata is a co-author, has been published in bioRxiv. The paper is available from here.

2021/07/13
Professor Ishihama had invited presentation at the 47th BMS Conference (BMS2020/2021) (Hybrid, Nasu-Kogen).

2021/07/10
The paper in collaboration with Takakura Lab (Graduate School of Pharmaceutical Sciences, Kyoto University), in which Specific Assistant Professor Ogata is a co-author, has been published in iScience. The paper is available from here.

2021/07/04
The paper by Ironman (PD), who used to be in Ishihama Lab, on phosphoproteomics using TMT labeling combined with targeted phosphopeptide libraries generated by in vitro kinase reactions has been published in bioRxiv. The paper is available from here.

2021/06/30-2021/07/02
The presentation by Specific Assistant Professor Ogata and Tomoya Niinae (D3) at the 10th Asia-Oceania Human Proteome Organization (AOHUPO) Congress was selected for the 10th AOHUPO Presentation Award. Congratulations!

2021/06/30-2021/07/02
At the 10th Asia-Oceania Human Proteome Organization (AOHUPO) Congress (Hybrid: Busan, Korea), Professor Ishihama had invited presentation, Specific Assistant Professor Ogata had oral presentation, and Specific Senior Lecturer Imami, Tomoya Niinae (D3), Hiroshi Nishida (D2), Ayana Nakai (M2) and Kana Nakata (M2) had poster presentations.

2021/6/27
Tomoya Niinae's (D3) paper about the method for physiological substrate identification of kinases using proximity labeling has been published in Molecular & Cellular Proteomics. The paper is available from here.

2021/06/16
Ion Mobility Prediction Paper, "Sequence-Specific Model for Predicting Peptide Collision Cross Section Values in Proteomic Ion Mobility Spectrometry" was published in Journal of Proteome Research.

2021/05/30
Acetylome paper by Tsumagari (an alumnus), "Acylated peptide enrichment utilizing lysine deacylases for lysine acylomics" was published in Biochemical and Biophysical Research Communications.

2021/05/29
Specific Assistant Professor Yoshizawa had invited presentation at the 17th Meeting of the Japanese Society for Clinical Proteogenomics (Online).

2021/04/16
"The Escherichia coli S2P intrame was published in mbrane protease RseP regulates ferric citrate uptake by cleaving the sigma factor regulator FecR" was publised in Journal of Biological Chemistry.

2021/04/14
Yuka Li, then B4 (now M1), was selected for the Best Student Presentation Award in the oral presentation at 141th Annual Meeting of the Pharmaceutical Society of Japan held online in March. Congratulations!

2021/04/01
New Comers to the lab have appeared. Kauzunori Machida, Kazuya Morikawa, Takumi Kudou, Asato Maeda, Yutaro Asano, and Toshiki Hanada became our new lab members!

2021/03/31
Junki Uchiyama, Ryota Tomioka and Yuki Yoshikawa have graduated from the lab. We hope they can start wonderful new life in their each way!!

2021/03/31
"Porphyromonas gingivalis induces entero-hepatic metabolic derangements with alteration of gut microbiota in a type 2 diabetes mouse model" was published in Research Square.

2021/03/29
Paper by Tsumagari-san and Harry (alumni) "Exploring the landscape of ectodomain shedding by quantitative protein terminomics" was prereleased.

2021/03/28
Harry and Takahashi-san (alumni) received their Ph.D Congratulations!

2021/03/26-29
Yuka Li (B4), Yuta Watanabe (B4) and Takuya Hikita (B4) had oral presentation at 141th Annual Meeting of the Pharmaceutical Society of Japan (Online).

2021/03/02
"Exploring the landscape of ectodomain shedding by quantitative protein terminomics" was published in Iscience.

2021/02/20
"Maintenance of neural stem‐progenitor cells by the lysosomal biosynthesis regulators TFEB and TFE3 in the embryonic mouse telencephalon" was published in STEM CELLS.

2021/01/30
"Effect of Phosphorylation on the Collision Cross Sections of Peptide Ions in Ion Mobility Spectrometry" was published in Mass Spectrometry.

2021/01/21
"Protein synthesis in the developing neocortex at near-atomic resolution reveals Ebp1-mediated neuronal proteostasis at the 60S tunnel exit" was published in Molecular cell.

2021/01/12
"Aberrant splicing isoforms detected by full-length transcriptome sequencing as transcripts of potential neoantigens in non-small cell lung cancer" was published in Genome biology.

2021/01/12
"Aberrant splicing isoforms detected by full-length transcriptome sequencing as transcripts of potential neoantigens in non-small cell lung cancer" was published in Genome biology.

2021/01/08
"GlycoPOST realizes FAIR principles for glycomics mass spectrometry data" was published in Nucleic Acids Research.

2021/01/04
"Aberrant splicing isoforms detected by full-length transcriptome sequencing as transcripts of potential neoantigens in non-small cell lung cancer" was published in Genome biology.

2021/01/01
"The jPOST Repository as a Public Data Repository for Shotgun Proteomics" was published in Methods in Molecular Biology.

2021/01/01
"Escherichia coli S2P family intramembrane protease RseP is engaged in the regulated sequential cleavages of FecR in the ferric citrate signaling" was published in bioRxiv.

2021/01/01
"Monitoring mitochondrial translation by pulse SILAC" was published in bioRxiv.

2021/01/01
"Asia-Oceania HUPO: Past, Present, and Future" was published in Molecular & Cellular Proteomics.

2021/01/01
"Isolation of Acetylated and Unmodified Protein N-Terminal Peptides by Strong Cation Exchange Chromatographic Separation of TrypN-Digested Peptides" was published in Molecular & Cellular Proteomics.

2020/12/22
"Protein synthesis in the developing neocortex at near-atomic resolution reveals Ebp1-mediated neuronal proteostasis at the 60S tunnel exit" was published in Molecular Cell.

2020/12/2-4
Professor Ishihama, Associate professor Sugiyama, and Specific Senior Lecturer Imami had invited presentation at MBSJ 2019 (online).

2020/10/21
Professor Ishihama had invited presentation at HUPO Connect 2020 (online).

2020/09/19
Professor Ishihama had invited presentation at JSBMS 2020 (online).

2020/09/18
Ryota Tomioka (M2) had poster presentation at JSAC 2020 (online).

2020/09/01-09/02
Professor Ishihama and Specific Assistant Professor Yoshizawa had invited presentation at IIBMP2020 (online).

2020/06/04
Specific Assistant Professor Yoshizawa had poster presentation at ASMS2020Reboot (online).

2020/4/1
New Comers to the lab have appeared. Mao Uehara, Takuya Hikita, Takuru Yasui, Yuka Li, and Yuuta Watanabe became our new lab members!

2020/3/31
Hayato Uemura (B6), Koki Kibe (M2), Yumi Komori (M2), Junna Nakazono (M2), and Kazutaka Yachigo (M2) have graduated from the lab. We hope they can start wonderful new life in their each way!!

2020/02/19
Koki Kibe (M2) and Yumi Komori (M2) and Junna Nakazono (M2) and Hiroshi Nishida (M2) and Kazutaka Yachigo (M2) had poster presentation at KBMSS (Kyoto).

2020/02/07
Specific Senior Lecturer Imami had invited presentation at RIKEN Center for Integrative Medical Sciences IMS Immunobiology SEMINAR (Kanagawa).

2020/01/08
Specific Assistant Professor Ogata and Hiroshi Nishida (M2) won a “AOMSC travel award” at AOMSC 2020 (Macau).

2020/01/08
Hiroshi Nishida (M2) won a “AOMSC best poster award” at AOMSC 2020 (Macau).

2020/01/05-07
Professor Ishihama had invited presentation and Specific Assistant Professor Ogata had oral presentation and Hiroshi Nishida (M2) had poster presentation at AOMSC2020 (Macau).

2019/12/05-07
Specific Assistant Professor Ogata had oral presentation and Researcher Chih-Hsiang Chang and Tomoya Niinae (D1) and Moon Joo Hyun (M1) had poster presentation and Yumi Komori (M2) and Junna Nakazono (M2) and Hiroshi Nishida (M2) and Kazutaka Yachigo (M2) had oral and poster presentation at SCS30 (Kyoto).

2019/12/03-06
Specific Senior Lecturer Imami had invited presentation and Koki Kibe (M2) and Junki Uchiyama (M1) had poster presentation at MBSJ 2019 (Fukuoka).

2019/12/05
Joo Hyun Moon (M1) won a “The Analytical Sciences Poster Award, sponsored by JSAC” at HPLC 2019 (Kyoto).

2019/12/01-05
Professor Ishihama had invited presentation and Researcher Chih-Hsiang Chang had oral and poster presentation and Specific Assistant Professor Ogata and Tomoya Niinae (D1) and Junna Nakazono (M2) and Hiroshi Nishida (M2) and Kazutaka Yachigo (M2) and Moon Joo Hyun (M1) had poster presentation at HPLC2019 Kyoto (Kyoto).

2019/11/28-12/05
Professor Ishihama had invited presentation at ICoFF2019、ISNFF2019 (Hyogo).

2019/10/23-26
Professor Ishihama had invited presentation at BCEIA 2019 (Beijing, People's Republic of China).

2019/09/27-29
Professor Ishihama had invited presentation at JSCC59 (Miyagi).

2019/10/08-09
We had a lab tour to Shiga and Gifu, Aichi (Japan). We enjoyed the world's largest planetarium. Pictures available from here!

2019/09/24-26
Specific Senior Lecturer Imami had oral presentation at RNA Frontier Meeting 2019 (Shizuoka).

2019/09/18
Specific Senior Lecturer Imami won a “The Incentive Award” at JBS2019 (Kanagawa). Congratulations!

2019/09/18-20
Specific Senior Lecturer Imami had oral presentation at JBS2019 (Kanagawa).

2019/09/15
Tomoya Niinae (D1) won a “HUPO Travel Award” at HUPO2019 (Adelaide, Australia). Congratulations!

2019/09/15-18
Tomoya Niinae (D1) had oral and poster presentation at HUPO2019 (Adelaide, Australia).

2019/09/11-13
Hayato Uemura (B6) and Junna Nakazono (M2) had poster presentation at JSAC2019 (Chiba).

2019/09/02
Koki Kibe (M2) won a “The Incentive Award” at PPF2019 (Shiga). Congratulations!

2019/09/02-03
Specific Assistant Professor Ogata and Koki Kibe (M2), Hiroshi Nishida (M2) had oral presentation at PPF2019 (Shiga).

2019/08/23-24
Yumi Komori (M2) and Kazutaka Yachigo (M2) had oral presentation at BMAS2019 (Tokyo).

2019/07/26
Specific Senior Lecturer Imami won a “The Incentive Award” at JPrOS2019 (Miyazaki). Congratulations!

2019/07/24-26
Specific Senior Lecturer Imami had invited presentation and Specific Assistant Professor Yoshizawa and Tomoya Niinae (D1), Junki Uchiyama (M1) had poster presentation and Yuki Yoshikawa (M1) had oral and poster presentation at JPrOS2019(Miyazaki).

2019/07/20
We held a BBQ party at Kuta river (Kyoto) as "Entrance exam cheer up party" for undergraduates and "Home coming party" of OB/OGs. Pictures available from here!

2019/07/09-10
Junna Nakazono (M2) had poster presentation at SHIMADZU global innovation summit 2019 (Kyoto).

2019/06/24
Professor Ishihama had invited presentation at Tokyo Cancer Moonshot Workshop (Tokyo).

2019/06/16-20
Professor Ishihama had invited presentation at 48th International Symposium on High-Performance Liquid Phase Separations and Related Techniques (Milan, Italy).

2019/6/6-7
Ryota Tomioka (M1) had oral and poster presentation at The 26th Chromatography Symposium (Okayama, Japan).

2019/6/2-6
Professor Ishihama, Assistant professor Ogata, Tomoya Niinae (D1), Hiroshi Nishida (M2) had poster presentation at ASMS2019.

2019/5/15-17
Hiroshi Nishida (M2) had oral presentation at The 67th Annual Conference on mass spectrometry (Tsukuba, Japan).

2019/4/7-11
Professor Ishihama had invited presentation and Kosuke Ogata (D3) had poster presentation at Keystone Symposium (Stockholm).

2019/4/1
New Comers to the lab have appeared. Tetsushi Kitsumoto, Ayana Nakai, Kana Nakata and Rentaro Yamashita became our new lab members!

2019/3/31
Yuta Sakamoto (M2), Saki Nambu (M2), and Michio Funahashi (M2) have graduated from the lab. We hope they can start wonderful new life in their each way!!

2019/3/21-23
Junki Uchiyama (B4), Yuya Takami (B4), Ryota Tomioka (B4) and Yuki Yoshikawa (B4) had oral presentation at 139th Annual Meeting of the Pharmaceutical Society of Japan. (Chiba).

2019/2/23
Yuta Sakamoto (M2), Saki Nambu (M2), Tomoya Niinae (M2), and Michio Funahashi (M2) had poster presentation at the 3rd KBMSS2019 (Kyoto).

2018/12
We had a lab tour to Kinosaki (Japan). We enjoyed hot springs. Pictures available from here!

2018/11/28-11/30
Professor Ishihama and Yuta Sakamoto(M2)had oral presentation and Tomoya Niinae(M2), Jyunna Nakazono(M1)and Kazutaka Yachigo(M1)had postor presentation at The 41st Annual Meeting of the Molecular Biology Society (Kanagawa)

2018/11/17
Assistnt professor Hsin-Yi Chang won a "The Best Presentation Award" at 2018 Annual meeting of Taiwan Proteomics Society. Congraturations!

2018/11/17
Assistant professor Hsin-Yi Chang had poster presentation at 2018 Annual meeting of Taiwan Proteomics Society (Taiwan)

2018/11/9
Saki Nambu(M2)won a "The Best Presentation Award" at the SCS2018. Congraturations!

2018/11/7-9
Professor Ishihama, Saki Nambu(M2), Michio Funahashi(M2)and Hiroshi Nishida(M1)had oral presentation at The 29th Conference of the Society for Chromatographic Sciences (Aichi)

2018/10/1-3
Professor Ishihama had poster presentation at HUPO2018 (Tokyo)

2018/9/19-9/21
Associate professor Yoshizawa and Koki Kibe(M1) had oral presentation at IIBMP2018 (Yamagata)

2018/8/30-9/1
Professor Ishihama and Associate professor Sugiyama had oral presentation and Chih-Hsiang Chang (D3) and Yuta Sakamoto(M2)had postor presentation at ITP2018 (Kyoto)

2018/8/28-29
Kosuke Ogata (D2), Saki Nambu(M2)and Yumi Komori (M1) had oral presentation at BMAS2018 (Fukuoka)

2018/8/26-29
Associate professor Yoshizawa, Kazuya Tsumagari (D3), Chih-Hsiang Chang (D3) had postor presentation at International Symposium on “Proteins;from the Cradle to the Grave”(Kyoto).

2017/7/22
We held a BBQ party at Kuta river (Kyoto) as a "Entrance exam cheer up party" for undergraduates and "Home coming party" of OB/OGs. Pictures available from here!

2018/6/13-15
Michio Funahashi(M2)had oral presentation and Hiroshi Nishida(M1)had postor presentation at The 24th Chromatography Symposium (Hirosaki, Aomori, Japan).

2018/6/3-7
Associate professor Yoshizawa and Kosuke Ogata (D2) had postor presentation at The 66th ASMS Conference (San Diego, California, USA).

2018/5/22-25
Associate professor Yoshizawa had oral presentation at 27th Symposium on Environmental Chemistry (Okinawa).

2018/5/19
Professor Ishihama had oral presentation at International Proteogenome Workshop 2018 (IPGW2018) (Kyoto).

2018/5/18
Assistnt professor Imami and Koki Kibe(M1)won a "The Best Presentation Award" at the MSP2018 (Osaka). Congraturations!

2018/5/15-18
Associate professor Sugiyama, assistant professor Hsin-Yi Chang, assistnt professor Imami, T.Pasrawin (D2), Michio Funahashi(M2), Koki Kibe(M1), Jyunna Nakazono(M1), Kazutaka Yachigo(M1)had oral presentation and Chih-Hsiang Chang (D3) had poster presentation at Mass Spectrometry and Proteomics 2018 (MSP2018) (Osaka).

2018/4/1
New Comers to the lab have appeared. Yumi Komori (M1), Junki Uchiyama, Yuya Takami, Ryota Tomizawa and Yuki Yoshikawa became our new lab members!

2018/3/31
Hironori Achiwa, Mariko Ito, Natsumi Ishikawa, Eito Yamamoto have graduated from the lab. We hope they can start wonderful new life in their each way!!

2018/3/6-7
Tomoya Niinae(M1), Hayato Uemura(B4), Hiroshi Nishida(B4), Kazutaka Yachigo(B4) had oral presentation at 138th Annual Meeting of the Pharmaceutical Society of Japan. (Kanazawa).

2018/3/6-7
Professor Ishihama and associate professor Yoshizawa had oral presentation at International Life Science Integration Workshop (Tokyo).

2018/2/3
Associate professor Sugiyama had oral presentation and Chisato Takahashi (D4), T.Pasrawin (D2), Saki Nambu (M1), Michio Funahashi (M1) and Jyunna Nakazono (B4) had poster presentation at the 2nd KBMSS2018 (Kyoto).

2017/12/10-13
Chih-Hsiang Chang (D2) had oral presentation and assistant professor Aki had poster presentation at the AOMSC 2017 (Singapore).

2017/12/6-9
Eito Yamamoto (M2) had oral presentation and assistant professor Aki and assistnt professor Yoshizawa had poster presentation at the Combio2017 (Kobe).

2017/11/17
Mr. Achiwa won a "The Best Presentation Award" at the SCS28 (Kyoto). Congraturations!

2017/11/15-17
Hironori Achiwa (M2) had oral presentation, and Yuta Sakamoto (M1), Saki Nambu (M1), Tomoya Niinae (M1),and Michio Funahashi (M1) had poster presentation at the 28th Conference of The Society for Chromatographic Science (Kyoto).

2017/10/19-20
We had a lab tour to Setonaikai (Japan). We enjoyed cultural experience. Pictures available from here!

2017/9/17-21
Professor Ishihama had oral presentation, and assistant professor Yoshizawa, Kazuya Tsumagari (D3), Kosuke Ogata (D1) had poster presentation at the 16th Human Proteome Organization World Congress(Dublin, Ireland).

2017/8/28-29
Hironori Achiwa (M2) and Saki Nambu (M1) had oral presentation at BMAS2017 (Tokyo).

2017/7/26-28
Chia-Feng Tsai (PD), Kazuya Tsumagari (D3), Chih-Hsiang Chang (D2), Kosuke Ogata (D1) and Mariko Ito (M2) had poster presentation at the 15th JHUPO Conference (Osaka).

2017/7/22
We held a BBQ party at Kuta river (Kyoto) as a "Entrance exam cheer up party" for undergraduates and "Home coming party" of OB/OGs. Pictures available from here!

2017/6/14-16
Michio Funahashi (M1) had oral presentation at The 24th Chromatography Symposium (Miyagi, Japan).

2017/5/17-19
Assistant Prof. Yoshizawa and Yuta Sakamoto (M1) had oral presentation, Tomoya Niinae (M1) had poster presentation at The 65th Annual Conference on mass spectrometry (Osaka, Japan).

2017/4/3
New Comers to the lab have appeared. Hayato Uemura, Koki Kibe, Junna Nakazono, Hiroshi Nishida and Kazutaka Yachigo became our new lab members!

2016/11/30-12/02
Professor Ishihama had oral presentation, Dai Sakamoto (M2), Natsuki Shikida (M2) and Eito Yamamoto (M1) had poster presentation at The 39th Annual Meeting of the Molecular Biology Society of Japan (Japan). Congraturations to Mr. Sakamoto on winning the best poster prize!

2016/11/16-18
Hironori Achiwa (M1) had oral presentation, and Miho Ogasawara (M2) had poster presentation at 27th Conference of The Society for Chromatographic Science.

2016/10/20-21
We had a lab tour to Wakayama (Japan). We enjoyed seafood and hot spring. Pictures available from here!

2016/9/25-27
Professor Ishihama and Mariko Ito (M1) had oral presentation, and Miho Ogasawara (M2) had poster presentation at the 89th Annual meeting of the Japanese Biochemical Society (Japan).

2016/9/18-21
Professor Ishihama, assistant professor Sugiyama and Hsin-Yi Chang (PD) had oral presentation, and Chia-Feng Tsai (PD),Chisato Takahashi (D4), Kazuya Tsumagari (D2) had poster presentation at 15th Human Proteome Organization World Congress (Taipei).

2016/9/3
Ms. Ogasawara won a "Hoshino Best Presentation Award" at the BMAS2016 (Kyoto). Congraturations!

2016/9/2-3
Associate professor Sugiyama and assistant professor Wakabayashi had oral presentation, and Pasrawin(D1), Miho Ogasawara(M2), Natsuki Shikida(M2) and Mariko Ito(M1) had poster presentation at BMAS2016 (Kyoto).

2016/8/20-26
Professor Ishihama had oral presentation, and Kosuke Ogata(M2) had poster presentation at 21st IMSC (Toronto, Canada).

2016/7/29
Mr. Sakamoto won a Student Best Presentation Award at the 14th JHUPO Conference, congratulations !

2016/7/28-29
Associate professor Sugiyama, assistant professor Wakabayashi, Chisato Takahashi(D4), Pasrawin(D1) and Dai Sakamoto(M2) had oral presentation, and Hironori Achiwa(M1) had poster prersentation at the 14th JHUPO Conference (Tokyo).

2016/07/23
We held a BBQ party at Kuta river (Japan, Kyoto) as a "Entrance exam cheer up party" for undergraduates and "Home coming party" of OB/OGs.

2016/06/5-9
Chia-Feng Tsai (PD), Hsin-Yi Chang (PD), and Professor Ishihama had poster presentation at The 64th ASMS Conference (San Antonio, Texas).

2016/05/18-20
Kazuya Tsumagari (D2), Kosuke Ogata (M2), and Eito Yamamoto (M1) had oral, Dai Sakamoto (M2) had poster presentation at the 64th Annual Conference on Mass Spectrometry, Japan.

2013-9
We had a lab tour to Atami (Japan), a place famous for its excellent hot springs. Pictures available from here!

2013/9/14-18
All the lab members (including undergraduates) presented poster or oral presentation at HUPO (12th congress, Yokohama). Congratulations for Mayu Ogura's (M1) nice oral presentation!!

2013/7/20
We held a BBQ party at Kuta river (Japan, Kyoto) as a "Entrance exam cheer up party" for underguraduates and "Home coming party" of OB/OGs. Pictures available from here!

2013/4/1
New commers to the lab have appeared!! Takeo Kamakura, Michiko Kimura, Satomi Miyake, Tatsuya Yazaki became our new lab members!

2013/3/31
Yukiko Yamamoto, Shigeharu Yoshida and Mio Iwasaki have graduated from the lab. We hope they can start wonderful new life in their each way!!

2013/1/7
Dr. Sugiyama from IAB has taken up associate professor's post. We are going to make this year fruitful than ever with this new lab member!!

New!  2012/12/27
Facebook account of Ishihama lab has been open, check it out!!

2012/12/10
A success on iPS cell proteomics has been published on Kyoto University web site. Also an article about it has been published on the Kyoto Shinbun (8th, Dec; p.31), the Sankei Shinbun (7th, Dec; p.29) and NIKKEI news paper (9th, Dec; p.38).

2012/12/4
A paper about iPS cell proteomics (co-research with Dr. Nakagawa and Dr. Yamanaka; Center for iPS Cell Research and Application, Kyoto University) has been published on J. Proteome Res. (Spcial issue of human proteome project).

2012/11/14-16
Assistant professor Wakabayashi and Yukiko Ymamoto (B6) had oral, Shunsuke Takagi (M1) had poster presentation at 23rd Conference of The Society for Chromatographic Sciences.

2012/10/3
A paper about phosphoproteomics of lapatinib was published on Mol Cell Proteomics (Sep 10, 2012).

A paper about phosphoproteomics of neural stem cell(co-work with Dr.Namiki and Dr.Okano, Keio university) was published on Stem Cells Int. (Sep 13, 2012)

2012/9/29
We had a BBQ party on a river side! You can see pictures fromhere.

2012/9/6
We are going to invite Dr. A.Heck (Universiteit Utrecht, the Netherlands) and Dr. M. MacCoss (University of Washington, USA) and hold a seminar. The topic is "Proteomics and transcriptions/metabolisms" and the site is multimedia seminar room at Kyoto University Department of Pharmaceutical Sciences. Please check the hand out for a detail.

2012/9/15-21
Assistant professor Wakabayashi, Mio Iwasaki (D3), Haruna Imamura (D2), Ayaka Sato (M1) and Shunsuke Takagi (M1) had poster presentations at 19th IMSC held in Kyoto.

2012/9/9-13
Assistant professor Wakabayashi, Mio Iwasaki (D3) and Haruna Imamura (D2) had poster presentations at 11th HUPO held in Boston.

2012/8/8-10
Ryota Yamana (B6) has won a best presenter's award at BMAS2012. Congratulations!!

2012/8/6-7
Assitant professor Wakabayashi and Yukiko Yamamoto (B6) have won a award for a young researcher at PPF2012. Congratulations!!

2012/7/30-31
We have held a retreat at "Plum-in Johyo". You can see pictures from here.

2012/7/26-7
Assistant professor Wakabayashi have presented a lecture at JHUPO 2012 annual meeting (held at Odaiba, Tokyo).And Mio Iwasaki (D3), Haruna Imamura (D2), Shigeharu Yoshida (M2), Shunsuke Takagi (M1) have done a poster presentation. What's more, Mio Iwasaki has won a Great poster award! Congratulations!!

2012/7/1
A review was published on a jouranal "Cancer and chemotherapy". The topic is "Phosphoproteomics and cancer treatment/diagnosis", authored by assistant professor Wakabayashi and professor Ishihama.

2012/5/15
Professor Ishihama and assistant professor Wakabayashi co-authored on a book "Clinical proteomics -Towards exploration of biomarkers to tailor made medicines", chapter 6 "Phosphoprylation".

2012/5/5-7
Assistant professor Masaki Wakabayashi and Mio Iwasaki (D3) presented a poster at AOHUPO (6th Congress, Beijing). They each won Young Scientist Travel Award and JHUPO travel award. Congratulations!

2012/5/1
Professor Ishihama and assistant professor Wakabayashi co-authored on a extra issue of "Jikken Igaku (Experimental Medical Science)", title is "Establishing of phosphoproteomics and exploration of diagnostic signaling molecular target." 2012/4/23
Paper about phosphorylation of synapsin (collaborative research) has been published on FEBS letter !

2012/4/1
Four under graduate students (Ichihara, Ogura, Hashimoto, Hayashi) and postdoctoral fellow Dr. Miao-Hsia Lin from Taiwan (JSPS postdoctoral foreign researchers) have newly joined to our lab.

2012/3/28-31
Takahashi and Yoshida had a oral, and Yokoyama had a poster presentation at 132nd annual meeting of the Pharmaceutical Society of Japan. (Held in Hokkaido.)
Ms. Takahashi won a Student Best Presentation Award, congratulations !

2012/3/9
Professor Ishihama held a requested lecture at 15th Kinki-regional Analytical Technologies Conference on title of "New insight of shotgun proteomics and challenges from separation sceince.". (The promoter: The Japan Society for Analytical Chemistry, the Kinki branch & Kinki-regional Analytical Technologies Conference)

2012/3/1
Nakano association professor has been promoted to professor of Graduate School of Medicine and Pharmaceutical Science for Education, University of Toyama.

Welcome to the Proteomics Laboratory !

 Technology-Driven Proteomics

On October 2010, professor Ishihama started up a new laboratory based on proteomics. Our main theme is to uncover the function of each individual protein and moreover, an integration of whole proteins (proteome), by measuring and analyzing samples in molecular and cellular levels. In order to reach our target, we use a molecular and cellular analysis assisted by separation and analytical sciences. Especially, we are focusing on developing proteomic methodologies based on mass spectrometry, microseparation sciences and bioinformatics. Furthermore, we are challenging toward practical applications to analysis of cellular functions and drug discoveries.